Standardize the Measurement.
Scale the Science.

Forget complex parameter tuning and building analysis pipelines. Cytely automatically identifies the cells and objects in your sample with minimal configuration. Simply drag-and-drop your images and define your high-level goals; Cytely handles the complex setup. This contrasts sharply with tools requiring extensive user expertise. Cytely's approach significantly simplifies advanced microscopy, making it accessible to more researchers by removing the need for deep knowledge of both microscope hardware and complex analysis software like ImageJ or CellProfiler.

Cytely goes beyond data collection: it turns complex image data into immediate insight. Once analysis is complete, you're presented with a fully interactive interface: scatter plots of extracted features, a panel of cropped cell images, and a spatial map showing each object's position within the sample. Define populations by drawing gates directly on the scatter plots. As you do, both the image gallery and spatial map update in real time to reflect your selection. Every data point is a cell you can see, not just a number. All extracted features, including intensity, size, and shape, are instantly available for plotting. Gates can be added, renamed, and reused without reprocessing. No scripts. No pipelines. Just visual, intuitive, exploratory analysis.

Continue using your existing microscope setup. Cytely integrates seamlessly into your imaging workflow: scan broadly, upload your data, and let Cytely handle the segmentation, feature extraction, and visualization. No special acquisition hardware or software required. This keeps you in control of imaging while Cytely augments the downstream analysis, eliminating the need for manual image curation or post hoc guessing. It's the fastest way to turn microscopy into insight.

Identify populations of interest through gating and send their coordinates back to the microscope for high-resolution or multi-modal follow-up imaging. Cytely supports a feedback loop known as Data-Driven Acquisition (DDA), allowing you to capture the most informative cells, not just what happens to be in frame. Whether you're capturing rare events or dynamic processes like actin remodeling, Cytely lets you zero in on what matters without scanning every cell manually. This creates a seamless cycle from discovery to deep dive, powered by your own data.